Review article2024Peer reviewedOpen access
A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses
Hakimzadeh, Ali; Abdala Asbun, Alejandro; Albanese, Davide et al.
Mikael Brandström Durling
Department of Forest Mycology and Plant Pathology
Email: mikael.durling@slu.se
Publications
2024
2023
Research article2023Peer reviewedOpen access
Multiple rearrangements and low inter- and intra-species mitogenome sequence variation in the Heterobasidion annosum s.l. species complex
Himmelstrand, Kajsa; Durling, Mikael Brandstrom; Karlsson, Magnus et al.
Book chapter2023Peer reviewed
Sample preparation for fungal community analysis by high-throughput sequencing of barcode amplicons
Clemmensen, Karina; Ihrmark, Katarina; Brandström Durling, Mikael et al.
2021
Research article2021Peer reviewedOpen access
Comparative genomics highlights the importance of drug efflux transporters during evolution of mycoparasitism in Clonostachys subgenus Bionectria (Fungi, Ascomycota, Hypocreales)
Broberg, Martin; Dubey, Mukesh; Iqbal, Mudassir et al.
Research article2021Peer reviewedOpen access
Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals potentially adaptive differences in secondary metabolite and transposable element repertoires
Elfstrand, Malin; Chen, Jun; Cleary, Michelle et al.
Research article2021Peer reviewedOpen access
A tipping point in carbon storage when forest expands into tundra is related to mycorrhizal recycling of nitrogen
Clemmensen, Karina Engelbrecht; Durling, Mikael Brandstrom; Michelsen, Anders et al.
Research article2021Peer reviewed
Fungal cross-talk: an integrated approach to study distance communication
Zapparata, Antonio; Baroncelli, Riccardo; Durling, Mikael Brandstrom et al.
2020
Research article2020Peer reviewedOpen access
Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities
Castano, Carles; Berlin, Anna; Brandstrom Durling, Mikael et al.
Research article2020Peer reviewedOpen access
Transcriptional responses in developing lesions of European common ash (Fraxinus excelsior) reveal genes responding to infection by Hymenoscyphus fraxineus
Sahraei, Shadi Eshghi; Cleary, Michelle; Stenlid, Jan et al.
Research article2020Peer reviewedOpen access
Marker-Trait Associations for Tolerance to Ash Dieback in Common Ash (Fraxinus excelsior L.)
Chaudhary, Rajiv; Ronneburg, Tilman; Aslund, Matilda Stein et al.
Research article2020Peer reviewedOpen access
Natural variation of root lesion nematode antagonism in the biocontrol fungus Clonostachys rosea and identification of biocontrol factors through genome-wide association mapping
Iqbal, Mudassir; Broberg, Martin; Haarith, Deepak et al.
Research article2020Peer reviewedOpen access
The conifer root rot pathogens Heterobasidion irregulare and Heterobasidion occidentale employ different strategies to infect Norway spruce
Hu, Yang; Elfstrand, Malin; Stenlid, Jan et al.
2019
Conference abstract2019
Genome-wide association mapping identifies membrane efflux transporters as a key component in fungicide tolerance in the biocontrol fungus Clonostachys rosea
Broberg, Martin; Dubey, Mukesh; Iqbal, Mudassir et al.
Research article2019Peer reviewedOpen access
Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum
Clergeot, Pierre-Henri; Rode, Nicolas O.; Glemin, Sylvain et al.
2018
Research article2018Peer reviewedOpen access
Out in the Cold: Identification of Genomic Regions Associated With Cold Tolerance in the Biocontrol Fungus Clonostachys rosea Through Genome-Wide Association Mapping
Broberg, Martin; Dubey, Mukesh; Sun, Man-Hong et al.
Conference abstract2018Peer reviewed
Transcriptome and genome analyses of the biocontrol fungus Clonostachys rosea highlights toxin tolerance as a key biocontrol trait
Nygren, K.; Dubey, M.; Zapparata, A. et al.
Research article2018Peer reviewedOpen access
Deciphering the genome and secondary metabolome of the plant pathogen Fusarium culmorum
Schmidt, Ruth; Durling, Mikael B.; de Jager, Victor et al.
Research article2018Peer reviewedOpen access
The mycoparasitic fungus Clonostachys rosea responds with both common and specific gene expression during interspecific interactions with fungal prey
Nygren, Kristiina; Dubey, Mukesh; Zapparata, Antonio et al.
Research article2018Peer reviewedOpen access
The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings
Balasundaram, S. V.; Hess, J.; Durling, M. B. et al.
2017
Research article2017Peer reviewedOpen access
Draft genome of the brown-rot fungus Fomitopsis pinicola GR9-4
Kancherla, Reddy Prakash; Brandström Durling, Mikael; Stenlid, Jan et al.
Research article2017Peer reviewed
Genomes of Hymenoscyphus fraxineus and Hymenoscyphus albida encode surprisingly large cell wall degrading potential, balancing saprotrophic and necrotrophic signatures
Stenlid, Jan; Elfstrand, Malin; Cleary, Michelle et al.
2016
Conference paper2016
Genome and transcriptome analyses of the mycoparasite Clonostachys rosea highlights mycotoxin tolerance as a key biocontrol trait
Nygren, Kristiina; Dubey, Mukesh; Brandström Durling, Mikael et al.
Book chapter2016Peer reviewed
Sample Preparation for Fungal Community Analysis by High-Throughput Sequencing of Barcode Amplicons
Clemmensen, Karina Engelbrecht; Ihrmark, Katarina; Durling, Mikael Brandstrom et al.;Martin, F (ed.);Uroz, S (ed.).
Research article2016Peer reviewedOpen access
Genus-Specific Primers for Study of Fusarium Communities in Field Samples
Karlsson, Ida; Edel-Hermann, Véronique; Gautheron, Nadine et al.
2015
Research article2015Peer reviewedOpen access
Insights on the Evolution of Mycoparasitism from the Genome of Clonostachys rosea
Karlsson, Magnus; Brandström Durling, Mikael; Tzelepis, Georgios et al.