Forskningsartikel2024Vetenskapligt granskad
Influence of rapid vertical mixing on bacterial community assembly in stratified water columns
Wu, Hainan; Bertilsson, Stefan; Li, Yi et al.
Stefan Bertilsson
Institutionen för vatten och miljö
Fakulteten för naturresurser och jordbruksvetenskap
E-post: stefan.bertilsson@slu.se
ORCID: 0000-0002-4265-1835
Publikationer
2024
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
Unmasking the physiology of mercury detoxifying bacteria from polluted sediments
Pereira-Garcia, Carla; del Amo, Elena H.; Vigues, Nuria et al.
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
Fluorescently labeled prey surrogates in combination with fluorescence-activated cell sorting successfully discriminate actively feeding mixotrophs in a lake water sample
Florenza, Javier; Divne, Anna-Maria; Bertilsson, Stefan.
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
Continental scientific drilling and microbiology: (extremely) low biomass in bedrock of central Sweden
Westmeijer, George; Escudero, Cristina; Bergin, Claudia et al.
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
Metagenomic insights into the prokaryotic communities of heavy metal-contaminated hypersaline soils
Galisteo, Cristina; Puente-Sanchez, Fernando; de la Haba, Rafael R. et al.
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
Geographic population structure and distinct intra-population dynamics of globally abundant freshwater bacteria
Hoetzinger, Matthias; Hahn, Martin W.; Andersson, Linnea Y. et al.
Forskningsartikel2024Vetenskapligt granskad
Integrating experiments with modeling to understand key bacterial taxa dynamics after episodic mixing of a stratified water column
Wu, Hainan; Li, Yi; Bertilsson, Stefan et al.
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
Enriching barcoding markers in environmental samples utilizing a phylogenetic probe design: Insights from mock communities
Nota, Kevin; Orlando, Ludovic; Marchesini, Alexis et al.
Forskningsartikel2024Vetenskapligt granskadÖppen tillgång
A sedimentary DNA perspective about the influence of environmental and food-web changes on the microbial eukaryotic community of Lake Biwa
Capo, Eric; Picard, Mailys; Nakane, Kai et al.
2023
Forskningsartikel2023Vetenskapligt granskad
Sulfate-reduction and methanogenesis are coupled to Hg(II) and MeHg reduction in rice paddies
Wu, Qingqing; Wang, Baolin; Hu, Haiyan et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Microbial communities mediating net methylmercury formation along a trophic gradient in a peatland chronosequence
Wang, Baolin; Hu, Haiyan; Bishop, Kevin et al.
Forskningsartikel2023Vetenskapligt granskad
Riverine microbial communities impacted by per- and polyfluoroalkyl substances (PFAS) emissions from a fluoropolymer-manufacturing plant
Guo, Chao; Ahrens, Lutz; Bertilsson, Stefan et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Large-scale phylogenomics of aquatic bacteria reveal molecular mechanisms for adaptation to salinity
Jurdzinski, Krzysztof T.; Mehrshad, Maliheh; Delgado, Luis Fernando et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Thiobacillus as a key player for biofilm formation in oligotrophic groundwaters of the Fennoscandian Shield
Lopez-Fernandez, Margarita; Westmeijer, George; Turner, Stephanie et al.
Översiktsartikel2023Vetenskapligt granskad
Properly interpret metabolic inhibition results to identify primary mercury methylating microbes
Lei, Pei; Yu, Ri-Qing; Kong, Yaqi et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Choice of methodology and surrogate prey are decisive for the quality of protistan bacterivory rate estimates
Florenza, Javier; Bertilsson, Stefan.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Homogenisation of water and sediment bacterial communities in a shallow lake (lake Balihe, China)
Zhong, Meifang; Capo, Eric; Zhang, Huayong et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Out of the blue: the independent activity of sulfur-oxidizers and diatoms mediate the sudden color shift of a tropical river
Arce-Rodriguez, Alejandro; Libby, Eduardo; Castellon, Erick et al.
Forskningsartikel2023Vetenskapligt granskad
Microcosm experiment to test bacterial responses to perfluorooctanoate exposure
Guo, Chao; Ahrens, Lutz; Bertilsson, Stefan et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
A consensus protocol for the recovery of mercury methylation genes from metagenomes
Capo, Eric; Peterson, Benjamin D.; Kim, Minjae et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Shotgun metagenomes from productive lakes in an urban region of Sweden
Rodriguez-Gijon, Alejandro; Hampel, Justyna J.; Dharamshi, Jennah et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Exploring environmental intra-species diversity through non-redundant pangenome assemblies
Puente-Sanchez, Fernando; Hoetzinger, Matthias; Buck, Moritz et al.
Översiktsartikel2023Vetenskapligt granskadÖppen tillgång
Investigating the effects of anthropogenic stressors on lake biota using sedimentary DNA
Barouillet, Cecilia; Monchamp, Marie-Eve; Bertilsson, Stefan et al.
Forskningsartikel2023Vetenskapligt granskadÖppen tillgång
Redox gradient shapes the abundance and diversity of mercury-methylating microorganisms along the water column of the Black Sea
Cabrol, L.; Capo, E.; van, Vliet, D.M. et al.
2022
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Integrating multiple dimensions of ecological stability into a vulnerability framework
Urrutia-Cordero, Pablo; Langenheder, Silke; Striebel, Maren et al.
Översiktsartikel2022Vetenskapligt granskadÖppen tillgång
Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential
Capo, Eric; Monchamp, Marie-Eve; Coolen, Marco J. L. et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Connectivity of Fennoscandian Shield terrestrial deep biosphere microbiomes with surface communities
Westmeijer, George; Mehrshad, Maliheh; Turner, Stephanie et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Norway spruce postglacial recolonization of Fennoscandia
Nota, Kevin; Klaminder, Jonatan; Milesi, Pascal et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Development of gut microbiota during the first 2 years of life
Wernroth, Mona-Lisa; Peura, Sari; Hedman, Anna M. et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Regional factors as major drivers for microbial community turnover in tropical cascading reservoirs
Vieira, Helena Henriques; Bagatini, Inessa Lacativa; de Moraes, Guilherme Pavan et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
COSC-2 - drilling the basal decollement and underlying margin of palaeocontinent Baltica in the Paleozoic Caledonide Orogen of Scandinavia
Lorenz, Henning; Rosberg, Jan-Erik; Juhlin, Christopher et al.
Annat bidrag i vetenskaplig tidskrift2022Vetenskapligt granskadÖppen tillgång
Multiomics in the central Arctic Ocean for benchmarking biodiversity change
Mock, Thomas; Boulton, William; Balmonte, John-Paul et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Expression Levels of hgcAB Genes and Mercury Availability Jointly Explain Methylmercury Formation in Stratified Brackish Waters
Capo, Eric; Feng, Caiyan; Bravo, Andrea G. et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Microbial trait-based approaches for agroecosystems
Krause, Sascha M. B.; Bertilsson, Stefan; Grossart, Hans-Peter et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
mOTUpan: a robust Bayesian approach to leverage metagenome-assembled genomes for core-genome estimation
Buck, Moritz; Mehrshad, Maliheh; Bertilsson, Stefan.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Genome-resolved analyses show an extensive diversification in key aerobic hydrocarbon-degrading enzymes across bacteria and archaea
Somee, Maryam Rezaei; Amoozegar, Mohammad Ali; Dastgheib, Seyed Mohammad Mehdi et al.
Forskningsartikel2022Vetenskapligt granskadÖppen tillgång
Oxygen-deficient water zones in the Baltic Sea promote uncharacterized Hg methylating microorganisms in underlying sediments
Capo, Eric; Broman, Elias; Bonaglia, Stefano et al.
Bokkapitel2022Vetenskapligt granskad
Diversity and Dynamics of Bacterial Communities in Freshwater Lakes
Bertilsson, S.; Mehrshad, M..
2021
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles
Holmfeldt, Karin; Nilsson, Emelie; Simone, Domenico et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Phosphorus Regulation of Methane Oxidation in Water From Ice-Covered Lakes
Sawakuchi, Henrique O.; Martin, Gaetan; Peura, Sari et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Distinct B cell subsets in Peyer's patches convey probiotic effects by Limosilactobacillus reuteri
Liu, Hao-Yu; Giraud, Antoine; Seignez, Cedric et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Freshwater Chlorobia exhibit metabolic specialization among cosmopolitan and endemic populations
Garcia, Sarahi L.; Mehrshad, Maliheh; Buck, Moritz et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Comprehensive analysis of chemical and biological problems associated with browning agents used in aquatic studies
Scharnweber, Kristin; Peura, Sari; Attermeyer, Katrin et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Biogeochemical influences on net methylmercury formation proxies along a peatland chronosequence
Wang, Baolin; Zhong, Shunqing; Bishop, Kevin et al.
Översiktsartikel2021Vetenskapligt granskadÖppen tillgång
Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations
Capo, Eric; Giguet-Covex, Charline; Rouillard, Alexandra et al.
Forskningsartikel2021Vetenskapligt granskad
Integrating experiments with system-level biogeochemical modeling to understand nitrogen cycling of reservoir sediments at elevated hydrostatic pressure
Wu, Hainan; Bertilsson, Stefan; Zhang, Wenlong et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater
Mehrshad, Maliheh; Lopez-Fernandez, Margarita; Sundh, John et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds
Buck, Moritz; Garcia, Sarahi L.; Fernandez, Leyden et al.
Forskningsartikel2021Vetenskapligt granskad
Hydrostatic pressure influence activity and assembly of bacterial communities in reservoir sediments
Wu, Hainan; Li, Yi; Zhang, Wenlong et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
SITES AquaNet: An open infrastructure for mesocosm experiments with high frequency sensor monitoring across lakes
Urrutia-Cordero, P.; Langvall, O.; Blomkvist, P. et al.