EpiCass And CassavaNet4Dev Advanced Bioinformatics Workshop
Other publication in scientific journal
Erik Bongcam Rudloff
Department of Animal Breeding and Genetics
Faculty of Veterinary Medicine and Animal Sciences
Email: Erik.Bongcam@slu.se
Publications
2023
Whole-Genome Resequencing Reveals Selection Signatures of Abigar Cattle for Local Adaptation
Research article (Peer reviewed)
Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action
Review article (Peer reviewed)
2022
Gene Networks and Pathways Involved in LPS-Induced Proliferative Response of Bovine Endometrial Epithelial Cells
Research article (Peer reviewed)
Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species
Research article (Peer reviewed)
Cassava Brown Streak Viruses express second 6-kilodalton (6K2) protein with varied polarity and three dimensional (3D) structures: Basis for trait discrepancy between the virus species
Research article (Peer reviewed)
Ebola virus disease and current therapeutic strategies: a review
Conference paper (Peer reviewed)
2021
Why has permanent control of cassava brown streak disease in Sub-Saharan Africa remained a dream since the 1930s?
Review article (Peer reviewed)
Cross-Sectional Variations in Structure and Function of Coral Reef Microbiome With Local Anthropogenic Impacts on the Kenyan Coast of the Indian Ocean
Research article (Peer reviewed)
Factors associated with risk of preterm delivery in Tanzania: A case-control study at Muhimbili National Hospital
Research article (Peer reviewed)
The heart microbiome of insectivorous bats from Central and South Eastern Europe
Research article (Peer reviewed)
Metagenomics workflow for hybrid assembly, differential coverage binning, metatranscriptomics and pathway analysis (MUFFIN)
Research article (Peer reviewed)
2020
High-Throughput Sequencing and Unsupervised Analysis of Formyltetrahydrofolate Synthetase (FTHFS) Gene Amplicons to Estimate Acetogenic Community Structure
Research article (Peer reviewed)
The need for standardisation in life science research - an approach to excellence and trust
Research article (Peer reviewed)
Abundance Tracking by Long-Read Nanopore Sequencing of Complex Microbial Communities in Samples from 20 Different Biogas/Wastewater Plants
Research article (Peer reviewed)
The Genome of Setaria digitata: A Cattle Nematode Closely Related to Human Filarial Parasites
Research article (Peer reviewed)
LPS-treatment of bovine endometrial epithelial cells causes differential DNA methylation of genes associated with inflammation and endometrial function
Research article (Peer reviewed)
Benefits and risks of barefoot harness racing in Standardbred trotters
Research article (Peer reviewed)
2019
Differential gene expression in bovine endometrial epithelial cells after challenge with LPS; specific implications for genes involved in embryo maternal interactions
Research article (Peer reviewed)
Changes induced by pathogens and metabolic stress on endometrial function in cattle: possible impacts of increased inflammation on fertility
Conference paper (Peer reviewed)
Simulating Illumina metagenomic data with InSilicoSeq
Research article (Peer reviewed)
2018
Standardization and Quality Assurance in Life-Science Research - Crucially Needed or Unnecessary and Annoying Regulation?
Conference paper (Peer reviewed)
The identification and classification of endogenous retroviruses in the horse genome
Research article (Peer reviewed)
An Interdisciplinary Approach Addressing Ticks and Tick-Borne Diseases of Cattle in Uganda
Conference abstract
A One Health approach to emerging zoonoses and biodiversity conservation in Sri Lanka
Conference poster
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