Research article2024Peer reviewedOpen access
Small RNAs: A new paradigm in fungal-fungal interactions used for biocontrol
Piombo, Edoardo; Vetukuri, Ramesh R.; Tzelepis, Georgios et al.
Publications
2024
Research article2024Peer reviewedOpen access
Transcriptomic analysis identifies candidate genes for Aphanomyces root rot disease resistance in pea
Kalin, Carol; Piombo, Edoardo; Bourras, Salim et al.
2023
Other publication in scientific journal2023Peer reviewed
Political deafness may impede transition to biological control
Stenberg, Johan A.; Becher, Paul G.; Jonsson, Mattias et al.
Research article2023Peer reviewedOpen access
Insights into the ecological generalist lifestyle of Clonostachys fungi through analysis of their predicted secretomes
Piombo, Edoardo; Guaschino, Micol; Jensen, Dan Funck et al.
Research article2023Peer reviewedOpen access
Multiple rearrangements and low inter- and intra-species mitogenome sequence variation in the Heterobasidion annosum s.l. species complex
Himmelstrand, Kajsa; Durling, Mikael Brandstrom; Karlsson, Magnus et al.
Research article2023Peer reviewedOpen access
Distribution and Environmental Drivers of Fungal Denitrifiers in Global Soils
Bosch, Yvonne; Pold, Grace; Saghai, Aurelien et al.
Research article2023Peer reviewedOpen access
Evaluation of pea genotype PI180693 partial resistance towards aphanomyces root rot in commercial pea breeding
Kalin, Carol; Brantestam, Agnese Kolodinska; Arvidsson, Anna-Kerstin et al.
2022
Research article2022Peer reviewedOpen access
Comparative Small RNA and Degradome Sequencing Provides Insights into Antagonistic Interactions in the Biocontrol Fungus Clonostachys rosea
Piombo, Edoardo; Vetukuri, Ramesh Raju; Sundararajan, Poorva et al.
Research article2022Peer reviewedOpen access
Minimizing tillage modifies fungal denitrifier communities, increases denitrification rates and enhances the genetic potential for fungal, relative to bacterial, denitrification
Bosch, Yvonne; Jones, Christopher M.; Finlay, Roger et al.
Report2022Peer reviewed
Microbial biocontrol agents in IPM strategies - reducing pesticide use in wheat and lowering the risk of fungicide resistance
Jensen, Birgit; Jørgensen, Hans J.L.; Collinge, David B. et al.
Research article2022Peer reviewedOpen access
Genetic diversity of the pea root pathogen Aphanomyces euteiches in Europe
Kalin, Carol; Berlin, Anna; Brantestam, Agnese Kolodinska et al.
2021
Research article2021Peer reviewedOpen access
Comparative genomics highlights the importance of drug efflux transporters during evolution of mycoparasitism in Clonostachys subgenus Bionectria (Fungi, Ascomycota, Hypocreales)
Broberg, Martin; Dubey, Mukesh; Iqbal, Mudassir et al.
Research article2021Peer reviewedOpen access
Genetic determinants of endophytism in the Arabidopsis root mycobiome
Mesny, Fantin; Miyauchi, Shingo; Thiergart, Thorsten et al.
Research article2021Peer reviewedOpen access
Role of Dicer-Dependent RNA Interference in Regulating Mycoparasitic Interactions
Piombo, Edoardo; Vetukuri, Ramesh R.; Broberg, Anders et al.
Book chapter2021Peer reviewed
Clonostachys rosea to control plant diseases
Jensen, Dan Funck; Dubey, Mukesh; Jensen, Birgit et al.
Book chapter2021Peer reviewed
The Fungal Chitinases
Tzelepis, Georgios; Karlsson, Magnus.
Research article2021Peer reviewedOpen access
Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals potentially adaptive differences in secondary metabolite and transposable element repertoires
Elfstrand, Malin; Chen, Jun; Cleary, Michelle et al.
Review article2021Peer reviewedOpen access
When is it biological control? A framework of definitions, mechanisms, and classifications
Stenberg, Johan A.; Sundh, Ingvar; Becher, Paul G. et al.
Research article2021Peer reviewed
Ferulic acid, an abundant maize phenolic, regulates ABC and MFS transporter gene expression in the maize pathogen Cochliobolus heterostrophus
Broberg, Martin; Simaan, Hiba; Shmoish, Michael et al.
Research article2021Peer reviewedOpen access
Reduction of the Adverse Impacts of Fungal Mycotoxin on Proximate Composition of Feed and Growth Performance in Broilers by Combined Adsorbents
Mgbeahuruike, Anthony Christian; Ejiofor, Toochukwu Eleazar; Ashang, Michael Ushie et al.
Research article2021Peer reviewedOpen access
Fungal X-Intrinsic Protein Aquaporin from Trichoderma atroviride: Structural and Functional Considerations
Ben Amira, Maroua; Faize, Mohamed; Karlsson, Magnus et al.
Research article2021Peer reviewed
Fungal cross-talk: an integrated approach to study distance communication
Zapparata, Antonio; Baroncelli, Riccardo; Durling, Mikael Brandstrom et al.
Research article2021Peer reviewedOpen access
Saccharomyces cerevisiae, bentonite, and kaolin as adsorbents for reducing the adverse impacts of mycotoxin contaminated feed on broiler histopathology and hemato-biochemical changes
Ejiofor, Toochukwu; Mgbeahuruike, Anthony Christian; Ojiako, Chiamaka et al.
Research article2021Peer reviewedOpen access
Functional characterization of the AGL1 aegerolysin in the mycoparasitic fungusTrichoderma atroviridereveals a role in conidiation and antagonism
Dubey, Mukesh; Jensen, Dan Funck; Karlsson, Magnus.
2020
Research article2020Peer reviewedOpen access
Identification, Antifungal Susceptibility and Phylogenetic Comparison of Fungi in Poultry Environment in Nigeria
Mgbeahuruike, A.C.; Aliyoo, K.; Karlsson, Magnus et al.
Research article2020Peer reviewedOpen access
Natural variation of root lesion nematode antagonism in the biocontrol fungus Clonostachys rosea and identification of biocontrol factors through genome-wide association mapping
Iqbal, Mudassir; Broberg, Martin; Haarith, Deepak et al.
Conference abstract2020Open access
Genome-wide association identifies genomic regions in fungus Clonostachys rosea that influence antagonism and biocontrol of plant-parasitic nematodes
Iqbal, Mudassir; Broberg, Martin; Dubey, Mukesh et al.
Research article2020Peer reviewedOpen access
LysM Proteins Regulate Fungal Development and Contribute to Hyphal Protection and Biocontrol Traits in Clonostachys rosea
Dubey, Mukesh; Velez, Heriberto; Broberg, Martin et al.
2019
Conference abstract2019
Identification of genomic regions involved in production of nematicidal compounds in the biocontrol fungus Clonostachys rosea through genome-wide association mapping.
Iqbal, Mudassir; Dubey, Mukesh; Broberg, Martin et al.
Conference abstract2019
Genome-wide association mapping identifies membrane efflux transporters as a key component in fungicide tolerance in the biocontrol fungus Clonostachys rosea
Broberg, Martin; Dubey, Mukesh; Iqbal, Mudassir et al.
Research article2019Peer reviewedOpen access
Deletion of the Nonribosomal Peptide Synthetase Gene nps1 in the Fungus Clonostachys rosea Attenuates Antagonism and Biocontrol of Plant Pathogenic Fusarium and Nematodes
Iqbal, Mudassir; Dubey, Mukesh; Broberg, Anders et al.
Review article2019Peer reviewed
Killer toxin-like chitinases in filamentous fungi: Structure, regulation and potential roles in fungal biology
Tzelepis, Georgios; Karlsson, Magnus.
2018
Other publication2018
Biological control of plant-parasitic nematodes in carrot and wheat by the fungus Clonostachys rosea
Iqbal, M.; Dubey, M.; Viketoft, M. et al.
Research article2018Peer reviewedOpen access
Detoxification of Aflatoxin-Contaminated Poultry Feeds by 3 Adsorbents, Bentonite, Activated Charcoal, and Fuller's Earth
Mgbeahuruike, Anthony C.; Ejioffor, Tochukwu E.; Christian, Obasi C. et al.
Research article2018Peer reviewedOpen access
Out in the Cold: Identification of Genomic Regions Associated With Cold Tolerance in the Biocontrol Fungus Clonostachys rosea Through Genome-Wide Association Mapping
Broberg, Martin; Dubey, Mukesh; Sun, Man-Hong et al.
Research article2018Peer reviewedOpen access
Comparative evolutionary histories of fungal proteases reveal gene gains in the mycoparasitic and nematode-parasitic fungus Clonostachys rosea
Iqbal, Mudassir; Dubey, Mukesh; Gudmundsson, Mikael et al.
Research article2018Peer reviewedOpen access
Evolution and functional characterization of pectate lyase PEL12, a member of a highly expanded Clonostachys rosea polysaccharide lyase 1 family
Atanasova, Lea; Dubey, Mukesh; Grujic, Marica et al.
Research article2018Peer reviewedOpen access
Functional analysis of polyketide synthase genes in the biocontrol fungus Clonostachys rosea
Fatema, Umma; Broberg, Anders; Jensen, Dan Funck et al.
Other publication2018
Functional characterization of polyketide synthase genes in the biocontrol fungus Clonostachys rosea
Fatema, U.; Broberg, A.; Jensen, D. F. et al.
Conference abstract2018Peer reviewed
Transcriptome and genome analyses of the biocontrol fungus Clonostachys rosea highlights toxin tolerance as a key biocontrol trait
Nygren, K.; Dubey, M.; Zapparata, A. et al.
Research article2018Peer reviewedOpen access
Deciphering the genome and secondary metabolome of the plant pathogen Fusarium culmorum
Schmidt, Ruth; Durling, Mikael B.; de Jager, Victor et al.
Research article2018Peer reviewedOpen access
The mycoparasitic fungus Clonostachys rosea responds with both common and specific gene expression during interspecific interactions with fungal prey
Nygren, Kristiina; Dubey, Mukesh; Zapparata, Antonio et al.
Book chapter2018Peer reviewed
Necrotrophic mycoparasites and their genomes
Karlsson, Magnus; Atanasova, Lea; Jensen, Dan Funck et al.
Research article2018Peer reviewedOpen access
Evaluation of Clonostachys rosea for Control of Plant- Parasitic Nematodes in Soil and in Roots of Carrot and Wheat
Iqbal, Mudassir; Dubey, Mukesh; McEwan, Kerstin et al.
Research article2018Peer reviewedOpen access
Correlation of structure, function and protein dynamics in GH7 cellobiohydrolases from Trichoderma atroviride, T. reesei and T. harzianum
Borisova, Anna S.; Eneyskaya, Elena V.; Jana, Suvamay et al.
2017
Book chapter2017Peer reviewed
Fungal-fungal interactions : from natural ecosystems to managed plant production with emphasis on biological control of plant diseases
Jensen, Dan Funck; Karlsson, Magnus; Lindahl, Björn.
Research article2017Peer reviewed
Genomes of Hymenoscyphus fraxineus and Hymenoscyphus albida encode surprisingly large cell wall degrading potential, balancing saprotrophic and necrotrophic signatures
Stenlid, Jan; Elfstrand, Malin; Cleary, Michelle et al.
Review article2017Peer reviewed
Deglycosylating enzymes acting on N-glycans in fungi: Insights from a genome survey
Tzelepis, Georgios; Karlsson, Magnus; Suzuki, Tadashi.
Review article2017Peer reviewed
Necrotrophic Mycoparasites and Their Genomes
Karlsson, Magnus; Atanasova, Lea; Jensen, Dan Funck et al.
2016
Research article2016Peer reviewed
The ABC transporter ABCG29 is involved in H2O2 tolerance and biocontrol traits in the fungus Clonostachys rosea
Dubey, Mukesh; Jensen, Dan Funck; Karlsson, Magnus.