Bai, Bing; Schiffthaler, Bastian; van der Horst, Sjors et. al 2023 SeedTransNet: a directional translational network revealing regulatory patterns during seed maturation and germination Research article (Peer reviewed) DOI:10.1093/jxb/erac394
Akhter, Shirin; Westrin, Karl Johan; Zivi, Nathan et. al 2022 Cone-setting in spruce is regulated by conserved elements of the age-dependent flowering pathway Research article (Peer reviewed) DOI:10.1111/nph.18449
Chowdhury, Jamil; Kemppainen, Minna; Delhomme, Nicolas et. al 2022 Laccaria bicolor pectin methylesterases are involved in ectomycorrhiza development with Populus tremula x Populus tremuloides Research article (Peer reviewed) DOI:10.1111/nph.18358
Andre, Domenique; Marcon, Alice; Lee, Keh Chien et. al 2022 FLOWERING LOCUS T paralogs control the annual growth cycle in Populus trees Research article (Peer reviewed) DOI:10.1016/j.cub.2022.05.023
Liebsch, Daniela; Juvany, Marta; Li, Zhonghai et. al 2022 Metabolic control of arginine and ornithine levels paces the progression of leaf senescence Research article (Peer reviewed) DOI:10.1093/plphys/kiac244
Ohlund, Pontus; Delhomme, Nicolas; Hayer, Juliette et. al 2022 Transcriptome Analysis of an Aedes albopictus Cell Line Single- and Dual-Infected with Lammi Virus and WNV Research article (Peer reviewed) DOI:10.3390/ijms23020875
Bag, Pushan; Lihavainen, Jenna; Delhomme, Nicolas et. al 2021 An atlas of the Norway spruce needle seasonal transcriptome Research article (Peer reviewed) DOI:10.1111/tpj.15530
Christie, Nanette; Mannapperuma, Chanaka; Ployet, Raphael et. al 2021 qtlXplorer: an online systems genetics browser in the Eucalyptus Genome Integrative Explorer (EucGenIE) Research article (Peer reviewed) DOI:10.1186/s12859-021-04514-9
Papaioannou, Ioannis A.; Dutreux, Fabien; Peltier, France A. et. al 2021 Sex without crossing over in the yeast Saccharomycodes ludwigii Research article (Peer reviewed) DOI:10.1186/s13059-021-02521-w
Martin, Frida; Halvarsson, Peter; Delhomme, Nicolas et. al 2021 Exploring the beta-tubulin gene family in a benzimidazole-resistant Parascaris univalens population Research article (Peer reviewed) DOI:10.1016/j.ijpddr.2021.08.004
Seyfferth, Carolin; Wessels, Bernard A.; Vahala, Jorma et. al 2021 Populus PtERF85 Balances Xylem Cell Expansion and Secondary Cell Wall Formation in Hybrid Aspen Research article (Peer reviewed) DOI:10.3390/cells10081971
Mahboubi, Amir; Delhomme, Nicolas; Haggstrom, Sara et. al 2021 Small-scale sequencing enables quality assessment of Ribo-Seq data: an example from Arabidopsis cell culture Research article (Peer reviewed) DOI:10.1186/s13007-021-00791-w
Mahmud, A. K. M. Firoj; Delhomme, Nicolas; Nandi, Soumyadeep et. al 2021 ProkSeq for complete analysis of RNA-Seq data from prokaryotes Research article (Peer reviewed) DOI:10.1093/bioinformatics/btaa1063
Schneider, Andreas N.; Sundh, John; Sundstrom, Gorel et. al 2021 Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce Research article (Peer reviewed) DOI:10.1128/mSystems.00884-20
Zhang, Bo; Sztojka, Bernadette; Seyfferth, Carolin et. al 2020 The chromatin-modifying protein HUB2 is involved in the regulation of lignin composition in xylem vessels Research article (Peer reviewed) DOI:10.1093/jxb/eraa264
Sullivan, Alexis R.; Eldfjell, Yrin; Schiffthaler, Bastian et. al 2020 The Mitogenome of Norway Spruce and a Reappraisal of Mitochondrial Recombination in Plants Research article (Peer reviewed) DOI:10.1093/gbe/evz263
Kloth, Karen J.; Abreu, Ilka N.; Delhomme, Nicolas et. al 2019 PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding(1)([OPEN]) Research article (Peer reviewed) DOI:10.1104/pp.19.00635
Blokhina, Olga; Laitinen, Teresa; Hatakeyama, Yuto et. al 2019 Ray Parenchymal Cells Contribute to Lignification of Tracheids in Developing Xylem of Norway Spruce(1)([OPEN]) Research article (Peer reviewed) DOI:10.1104/pp.19.00743
Wessels, Bernard; Seyfferth, Carolin; Escamez, Sacha et. al 2019 An AP2/ERF transcription factor ERF139 coordinates xylem cell expansion and secondary cell wall deposition Research article (Peer reviewed) DOI:10.1111/nph.15960
Ranade, Sonali Sachin; Delhomme, Nicolas; Garcia-Gil, M. Rosario 2019 Global gene expression analysis in etiolated and de-etiolated seedlings in conifers Research article (Peer reviewed) DOI:10.1371/journal.pone.0219272
Seyfferth, Carolin; Wessels, Bernard A.; Gorzsas, Andras et. al 2019 Ethylene Signaling Is Required for Fully Functional Tension Wood in Hybrid Aspen Research article (Peer reviewed) DOI:10.3389/fpls.2019.01101
Kumar, Vikash; Hainaut, Matthieu; Delhomme, Nicolas et. al 2019 Poplar carbohydrate-active enzymes: whole-genome annotation and functional analyses based on RNA expression data Research article (Peer reviewed) DOI:10.1111/tpj.14417
Ranade, Sonali Sachin; Delhomme, Nicolas; Garcia-Gil, Maria Rosario 2019 Transcriptome analysis of shade avoidance and shade tolerance in conifers Research article (Peer reviewed) DOI:10.1007/s00425-019-03160-z
Zare, Aman; Johansson, Anna-Mia; Karlsson, Edvin et. al 2018 The gut microbiome participates in transgenerational inheritance of low-temperature responses in Drosophila melanogaster Research article (Peer reviewed) DOI:10.1002/1873-3468.13278
Reza, Salim H.; Delhomme, Nicolas; Street, Nathaniel R. et. al 2018 Transcriptome analysis of embryonic domains in Norway spruce reveals potential regulators of suspensor cell death Research article (Peer reviewed) DOI:10.1371/journal.pone.0192945