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Abstract

An Atlantic salmon (Salmo salar L.) expressed sequence tag (EST) database consisting of 58 146 ESTs was screened for microsatellite sequences. Subsequent development of 75 polymorphic EST-associated microsatellite markers in this species is described together with cross-species amplification results of 133 gene-associated tandem repeat markers in five salmonid species (Salmo trutta, Oncorhynchus mykiss, Salvelinus aplinus, Thymallus thymallus, Coregonus lavaretus). The number of alleles among EST-linked microsatellites in Atlantic salmon ranged from two to 41 with an average of 12 alleles per locus. Cross-species amplification resulted in detection of a total of ill polymorphic locus-species combinations (12-32 loci per species)

Published in

Molecular Ecology Notes
2005, volume: 5, number: 2, pages: 282-288
Publisher: BLACKWELL PUBLISHING

SLU Authors

  • Vasemägi, Anti

    • Department of Aquaculture, Swedish University of Agricultural Sciences

  • Nilsson, Jan

    • Department of Aquaculture, Swedish University of Agricultural Sciences

UKÄ Subject classification

Fish and Aquacultural Science

Publication identifier

  • DOI: https://doi.org/10.1111/j.1471-8286.2005.00902.x

Permanent link to this page (URI)

https://res.slu.se/id/publ/4463