Draft Genome of the Oomycete pathogen Phytophthora cactorum Strain LV007 isolated from European Beech (Fagus sylvatica)

Abstract

Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.

Published in

Genomics Data
2017, volume: 12, pages: 155-156

SLU Authors

• Grenville-Briggs Didymus, Laura

  • Department of Plant Protection Biology, Swedish University of Agricultural Sciences
    

• Kushwaha, Sandeep Kumar

  • Department of Plant Breeding, Swedish University of Agricultural Sciences
    
  • Lund University

• Cleary, Michelle

  • Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences
    

• Witzell, Johanna

  • Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences
    

• Savenkov, Eugene

  • Department of Plant Biology, Swedish University of Agricultural Sciences
    

• Chawade, Aakash

  • Department of Plant Breeding, Swedish University of Agricultural Sciences
    

• Vetukuri, Ramesh

  • Department of Plant Protection Biology, Swedish University of Agricultural Sciences
    

UKÄ Subject classification

Agricultural Science
Forest Science

Publication identifier

• DOI: https://doi.org/10.1016/j.gdata.2017.05.010

Permanent link to this page (URI)

https://res.slu.se/id/publ/81043