Nykyri, Johanna
- University of Helsinki
Abstract
Bacteria of the genus Pectobacterium are economically important plant pathogens that cause soft rot disease on a wide variety of plant species. Here, we report the genome sequence of Pectobacterium carotovorum strain SCC1, a Finnish soft rot model strain isolated from a diseased potato tuber in the early 1980's. The genome of strain SCC1 consists of one circular chromosome of 4,974,798 bp and one circular plasmid of 5524 bp. In total 4451 genes were predicted, of which 4349 are protein coding and 102 are RNA genes.
Keywords
Pectobacterium; Soft rot; Plant pathogen; Necrotroph; Potato; Finland
Published in
Standards in Genomic Sciences
2017, volume: 12, article number: 87
SLU Authors
Pirhonen, Minna
- University of Helsinki
UKÄ Subject classification
Other Agricultural Sciences not elsewhere specified
Microbiology
Publication identifier
- DOI: https://doi.org/10.1186/s40793-017-0301-z
Permanent link to this page (URI)
https://res.slu.se/id/publ/95644