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Research article - Peer-reviewed, 2021

Global transpiration data from sap flow measurements: the SAPFLUXNET database

Poyatos, Rafael; Granda, Victor; Flo, Victor; Adams, Mark A.; Adorjan, Balazs; Aguade, David; Aidar, Marcos P. M.; Allen, Scott; Susana Alvarado-Barrientos, M.; Anderson-Teixeira, Kristina J.; Aparecido, Luiza Maria; Arain, M. Altaf; Aranda, Ismael; Asbjornsen, Heidi; Baxter, Robert; Beamesderfer, Eric; Berry, Z. Carter; Berveiller, Daniel; Blakely, Bethany; Boggs, Johnny; Bohrer, Gil; Bolstad, Paul, V; Bonal, Damien; Bracho, Rosvel; Brito, Patricia; Brodeur, Jason; Casanoves, Fernando; Chave, Jerome; Chen, Hui; Cisneros, Cesar; Clark, Kenneth; Cremonese, Edoardo; Dang, Hongzhong; David, Jorge S.; David, Teresa S.; Delpierre, Nicolas; Desai, Ankur R.; Do, Frederic C.; Dohnal, Michal; Domec, Jean-Christophe; Dzikiti, Sebinasi; Edgar, Colin; Eichstaedt, Rebekka; El-Madany, Tarek S.; Elbers, Jan; Eller, Cleiton B.; Euskirchen, Eugenie S.; Ewers, Brent; Fonti, Patrick; Forner, Alicia; Forrester, David, I; Freitas, Helber C.; Galvagno, Marta; Garcia-Tejera, Omar; Ghimire, Chandra Prasad; Gimeno, Teresa E.; Grace, John; Granier, Andre; Griebel, Anne; Guangyu, Yan; Gush, Mark B.; Hanson, Paul J.; Hasselquist, Niles J.; Heinrich, Ingo; Hernandez-Santana, Virginia; Herrmann, Valentine; Holtta, Teemu; Holwerda, Friso; Irvine, James; Ayutthaya, Supat Isarangkool Na; Jarvis, Paul G.; Jochheim, Hubert; Joly, Carlos A.; Kaplick, Julia; Kim, Hyun Seok; Klemedtsson, Leif; Kropp, Heather; Lagergren, Fredrik; Lane, Patrick; Lang, Petra; Lapenas, Andrei; Lechuga, Victor; Lee, Minsu; Leuschner, Christoph; Limousin, Jean-Marc; Linares, Juan Carlos; Linderson, Maj-Lena; Lindroth, Anders; Llorens, Pilar; Lopez-Bernal, Alvaro; Loranty, Michael M.; Luttschwager, Dietmar; Macinnis-Ng, Cate; Marechaux, Isabelle; Martin, Timothy A.; Matheny, Ashley; McDowell, Nate; McMahon, Sean; Meir, Patrick; Meszaros, Ilona; Migliavacca, Mirco; Mitchell, Patrick; Molder, Meelis; Montagnani, Leonardo; Moore, Georgianne W.; Nakada, Ryogo; Niu, Furong; Nolan, Rachael H.; Norby, Richard; Novick, Kimberly; Oberhuber, Walter; Obojes, Nikolaus; Oishi, A. Christopher; Oliveira, Rafael S.; Oren, Ram; Ourcival, Jean-Marc; Paljakka, Teemu; Perez-Priego, Oscar; Peri, Pablo L.; Peters, Richard L.; Pfautsch, Sebastian; Pockman, William T.; Preisler, Yakir; Rascher, Katherine; Robinson, George; Rocha, Humberto; Rocheteau, Alain; Roll, Alexander; Rosado, Bruno H. P.; Rowland, Lucy; Rubtsov, Alexey, V; Sabate, Santiago; Salmon, Yann; Salomon, Roberto L.; Sanchez-Costa, Elisenda; Schafer, Karina V. R.; Schuldt, Bernhard; Shashkin, Alexandr; Stahl, Clement; Stojanovic, Marko; Suarez, Juan Carlos; Sun, Ge; Szatniewska, Justyna; Tatarinov, Fyodor; Tesar, Miroslav; Thomas, Frank M.; Tor-ngern, Pantana; Urban, Josef; Valladares, Fernando; van der Tol, Christiaan; van Meerveld, Ilja; Varlagin, Andrej; Voigt, Holm; Warren, Jeffrey; Werner, Christiane; Werner, Willy; Wieser, Gerhard; Wingate, Lisa; Wullschleger, Stan; Yi, Koong; Zweifel, Roman; Steppe, Kathy; Mencuccini, Maurizio; Martinez-Vilalta, Jordi
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Abstract

Plant transpiration links physiological responses of vegetation to water supply and demand with hydrological, energy, and carbon budgets at the land-atmosphere interface. However, despite being the main land evaporative flux at the global scale, transpiration and its response to environmental drivers are currently not well constrained by observations. Here we introduce the first global compilation of whole-plant transpiration data from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021). We harmonized and quality-controlled individual datasets supplied by contributors worldwide in a semi-automatic data workflow implemented in the R programming language. Datasets include sub-daily time series of sap flow and hydrometeorological drivers for one or more growing seasons, as well as metadata on the stand characteristics, plant attributes, and technical details of the measurements. SAPFLUXNET contains 202 globally distributed datasets with sap flow time series for 2714 plants, mostly trees, of 174 species. SAPFLUXNET has a broad bioclimatic coverage, with woodland/shrubland and temperate forest biomes especially well represented (80 % of the datasets). The measurements cover a wide variety of stand structural characteristics and plant sizes. The datasets encompass the period between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data are available for most of the datasets, while on-site soil water content is available for 56 % of the datasets. Many datasets contain data for species that make up 90 % or more of the total stand basal area, allowing the estimation of stand transpiration in diverse ecological settings. SAPFLUXNET adds to existing plant trait datasets, ecosystem flux networks, and remote sensing products to help increase our understanding of plant water use, plant responses to drought, and ecohydrological processes. SAPFLUXNET version 0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The "sapfluxnetr" R package - designed to access, visualize, and process SAPFLUXNET data - is available from CRAN.

Published in

Earth System Science Data
2021, volume: 13, number: 6, pages: 2607-2649
Publisher: COPERNICUS GESELLSCHAFT MBH

Authors' information

Poyatos, Rafael
Autonomous University of Barcelona
Poyatos, Rafael
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Granda, Victor
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Flo, Victor
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Adams, Mark A.
Swinburne University of Technology
Adams, Mark A.
University of Sydney
Adorjan, Balazs
University of Debrecen
Aguade, David
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Aidar, Marcos P. M.
Instituto de Botanica - Sao Paulo
Allen, Scott
University of Nevada Reno
Susana Alvarado-Barrientos, M.
Instituto de Ecologia - Mexico
Anderson-Teixeira, Kristina J.
Smithsonian Institution
Anderson-Teixeira, Kristina J.
Smithsonian Tropical Research Institute
Aparecido, Luiza Maria
Arizona State University
Aparecido, Luiza Maria
Texas AandM University College Station
Arain, M. Altaf
McMaster University
Aranda, Ismael
Instituto Nacional Investigacion Tecnologia Agraria Alimentaria (INIA)
Asbjornsen, Heidi
University of New Hampshire
Baxter, Robert
Durham University
Beamesderfer, Eric
McMaster University
Beamesderfer, Eric
Northern Arizona University
Berry, Z. Carter
Chapman University
Berveiller, Daniel
Universite Paris Saclay
Blakely, Bethany
University of Illinois Urbana-Champaign
Boggs, Johnny
United States Forest Service
Bohrer, Gil
Ohio State University
Bolstad, Paul
University of Minnesota Twin Cities
Bonal, Damien
Universite de Lorraine
Bracho, Rosvel
University of Florida
Brito, Patricia
Universidad de la Laguna
Brodeur, Jason
McMaster University
Chave, Jerome
Universite Toulouse III - Paul Sabatier
Chen, Hui
Xiamen University
Cisneros, Cesar
University of Twente
Clark, Kenneth
United States Forest Service
Cremonese, Edoardo
Regional Environmental Protection Agency - Italy
Dang, Hongzhong
Institute of Desertification Studies, CAF
David, Jorge S.
Universidade de Lisboa
David, Teresa S.
Instituto Nacional de Investigacao Agraria e Veterinaria, IP (INIAV)
David, Teresa S.
Universidade de Lisboa
Delpierre, Nicolas
Universite Paris Saclay
Delpierre, Nicolas
Institut Universitaire de France
Desai, Ankur R.
University of Wisconsin Madison
Do, Frederic C.
Universite de Montpellier
Dohnal, Michal
Czech Technical University Prague
Domec, Jean-Christophe
Duke University
Dzikiti, Sebinasi
Stellenbosch University
Edgar, Colin
University of Alaska Fairbanks
Eichstaedt, Rebekka
Universitat Trier
El-Madany, Tarek S.
Max Planck Society
Elbers, Jan
Wageningen University and Research
Eller, Cleiton B.
Universidade Estadual de Campinas
Euskirchen, Eugenie S.
University of Alaska Fairbanks
Ewers, Brent
University of Wyoming
Fonti, Patrick
Swiss Federal Institute for Forest, Snow and Landscape Research
Forner, Alicia
University of Valencia
Forner, Alicia
CSIC - Museo Nacional de Ciencias Naturales (MNCN)
Forrester, David
Swiss Federal Institute for Forest, Snow and Landscape Research
Freitas, Helber C.
Universidade Estadual Paulista
Freitas, Helber C.
Universidade de Sao Paulo
Galvagno, Marta
Regional Environmental Protection Agency - Italy
Garcia-Tejera, Omar
IRTA
Ghimire, Chandra Prasad
University of Twente
Ghimire, Chandra Prasad
AgResearch - New Zealand
Gimeno, Teresa E.
Basque Foundation for Science
Gimeno, Teresa E.
Basque Centre for Climate Change (BC3)
Grace, John
University of Edinburgh
Granier, Andre
NRAE
Griebel, Anne
Western Sydney University
Griebel, Anne
University of Melbourne
Guangyu, Yan
Xiamen University
Hanson, Paul J.
United States Department of Energy (DOE)
Hasselquist, Niles
Swedish University of Agricultural Sciences, Department of Forest Ecology and Management
Heinrich, Ingo
Helmholtz Association
Hernandez-Santana, Virginia
CSIC - Instituto de Recursos Naturales y Agrobiologia de Sevilla (IRNAS)
Herrmann, Valentine
Smithsonian Institution
Holtta, Teemu
University of Helsinki
Holwerda, Friso
Universidad Nacional Autonoma de Mexico
Irvine, James
University of Edinburgh
Ayutthaya, Supat Isarangkool Na
Khon Kaen University
Jarvis, Paul G.
University of Edinburgh
Jochheim, Hubert
Leibniz Zentrum fur Agrarlandschaftsforschung (ZALF)
Joly, Carlos A.
Universidade Estadual de Campinas
Joly, Carlos A.
Brazilian Platform Biodivers and Ecosyst Serv BPBES
Kaplick, Julia
University of Auckland
Kim, Hyun Seok
Seoul National University (SNU)
Klemedtsson, Leif
University of Gothenburg
Kropp, Heather
Colgate University
Kropp, Heather
Hamilton College
Lagergren, Fredrik
Lund University
Lane, Patrick
University of Melbourne
Lapenas, Andrei
State University of New York (SUNY) Albany
Lechuga, Victor
Universidad de Jaen
Lee, Minsu
Seoul National University (SNU)
Leuschner, Christoph
University of Gottingen
Limousin, Jean-Marc
Universite Paul-Valery
Linares, Juan Carlos
Universidad Pablo de Olavide
Linderson, Maj-Lena
Lund University
Lindroth, Anders
Lund University
Llorens, Pilar
CSIC - Instituto de Diagnostico Ambiental y Estudios del Agua (IDAEA)
Lopez-Bernal, Alvaro
Universidad de Cordoba
Loranty, Michael M.
Colgate University
Luttschwager, Dietmar
Leibniz Zentrum fur Agrarlandschaftsforschung (ZALF)
Macinnis-Ng, Cate
University of Auckland
Marechaux, Isabelle
Universite de Montpellier
Martin, Timothy A.
University of Florida
Matheny, Ashley
University of Texas Austin
McDowell, Nate
United States Department of Energy (DOE)
McMahon, Sean
Smithsonian Institution
Meir, Patrick
Australian National University
Meir, Patrick
University of Edinburgh
Meszaros, Ilona
University of Debrecen
Migliavacca, Mirco
Max Planck Society
Mitchell, Patrick
Commonwealth Scientific and Industrial Research Organisation (CSIRO)
Molder, Meelis
Lund University
Montagnani, Leonardo
Free University of Bozen-Bolzano
Moore, Georgianne W.
Texas AandM University College Station
Nakada, Ryogo
Forestry and Forest Products Research Institute - Japan
Niu, Furong
University of Gottingen
Niu, Furong
University of Arizona
Nolan, Rachael H.
Western Sydney University
Norby, Richard
University of Tennessee Knoxville
Novick, Kimberly
Indiana University Bloomington
Oberhuber, Walter
University of Innsbruck
Obojes, Nikolaus
European Academy of Bozen-Bolzano
Oishi, A. Christopher
United States Forest Service
Oliveira, Rafael S.
Universidade Estadual de Campinas
Oren, Ram
University of Helsinki
Ourcival, Jean-Marc
Universite Paul-Valery
Paljakka, Teemu
University of Helsinki
Perez-Priego, Oscar
Max Planck Society
Perez-Priego, Oscar
Macquarie University
Peri, Pablo L.
Instituto Nacional de Tecnologia Agropecuaria (INTA)
Peters, Richard L.
Ghent University
Peters, Richard L.
Swiss Federal Institute for Forest, Snow and Landscape Research
Pfautsch, Sebastian
Western Sydney University
Pockman, William T.
University of New Mexico
Preisler, Yakir
Weizmann Institute of Science
Rascher, Katherine
University of Cologne
Robinson, George
State University of New York (SUNY) Albany
Rocha, Humberto
Universidade de Sao Paulo
Rocheteau, Alain
Universite de Montpellier
Roll, Alexander
University of Gottingen
Rosado, Bruno H. P.
Universidade do Estado do Rio de Janeiro
Rowland, Lucy
University of Exeter
Rubtsov, Alexey
Siberian Federal University
Sabate, Santiago
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Sabate, Santiago
University of Barcelona
Salmon, Yann
University of Helsinki
Salomon, Roberto L.
Ghent University
Salomon, Roberto L.
Universidad Politecnica de Madrid
Sanchez-Costa, Elisenda
IRTA
Schuldt, Bernhard
University of Wurzburg
Shashkin, Alexandr
Sukachev Institute of Forest, Siberian Branch, Russian Academy of Sciences
Stahl, Clement
INRAE
Stojanovic, Marko
Global Change Research Centre of the Czech Academy of Sciences
Sun, Ge
United States Forest Service
Szatniewska, Justyna
Global Change Research Centre of the Czech Academy of Sciences
Tatarinov, Fyodor
Weizmann Institute of Science
Tesar, Miroslav
Institute of Hydrodynamics of the Czech Academy of Sciences
Thomas, Frank M.
Universitat Trier
Tor-ngern, Pantana
Chulalongkorn University
Urban, Josef
Mendel University in Brno
Urban, Josef
Siberian Federal University
Valladares, Fernando
CSIC - Museo Nacional de Ciencias Naturales (MNCN)
Valladares, Fernando
Universidad Rey Juan Carlos
van der Tol, Christiaan
University of Twente
van Meerveld, Ilja
University of Zurich
Varlagin, Andrej
Severtsov Institute of Ecology and Evolution
Voigt, Holm
University of Bonn
Warren, Jeffrey
United States Department of Energy (DOE)
Werner, Christiane
University of Freiburg
Werner, Willy
Universitat Trier
Wingate, Lisa
INRAE
Wullschleger, Stan
United States Department of Energy (DOE)
Yi, Koong
University of Virginia
Yi, Koong
Indiana University Bloomington
Zweifel, Roman
Swiss Federal Institute for Forest, Snow and Landscape Research
Steppe, Kathy
Ghent University
Mencuccini, Maurizio
ICREA
Mencuccini, Maurizio
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Martinez-Vilalta, Jordi
Centro de Investigacion Ecologica y Aplicaciones Forestales (CREAF)
Martinez-Vilalta, Jordi
Autonomous University of Barcelona
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UKÄ Subject classification

Ecology
Botany

Publication Identifiers

DOI: https://doi.org/10.5194/essd-13-2607-2021

URI (permanent link to this page)

https://res.slu.se/id/publ/112762