Research article2024Peer reviewedOpen access
Enriching barcoding markers in environmental samples utilizing a phylogenetic probe design: Insights from mock communities
Nota, Kevin; Orlando, Ludovic; Marchesini, Alexis et al.
Publications
2024
Research article2024Peer reviewedOpen access
A sedimentary DNA perspective about the influence of environmental and food-web changes on the microbial eukaryotic community of Lake Biwa
Capo, Eric; Picard, Mailys; Nakane, Kai et al.
Research article2024Peer reviewedOpen access
Geographic population structure and distinct intra-population dynamics of globally abundant freshwater bacteria
Hoetzinger, Matthias; Hahn, Martin W.; Andersson, Linnea Y. et al.
Research article2024Peer reviewedOpen access
Metagenomic insights into the prokaryotic communities of heavy metal-contaminated hypersaline soils
Galisteo, Cristina; Puente-Sanchez, Fernando; de la Haba, Rafael R. et al.
Research article2024Peer reviewedOpen access
Unmasking the physiology of mercury detoxifying bacteria from polluted sediments
Pereira-Garcia, Carla; del Amo, Elena H.; Vigues, Nuria et al.
Research article2024Peer reviewedOpen access
Fluorescently labeled prey surrogates in combination with fluorescence-activated cell sorting successfully discriminate actively feeding mixotrophs in a lake water sample
Florenza, Javier; Divne, Anna-Maria; Bertilsson, Stefan.
Research article2024Peer reviewedOpen access
Continental scientific drilling and microbiology: (extremely) low biomass in bedrock of central Sweden
Westmeijer, George; Escudero, Cristina; Bergin, Claudia et al.
Research article2024Peer reviewed
Influence of rapid vertical mixing on bacterial community assembly in stratified water columns
Wu, Hainan; Bertilsson, Stefan; Li, Yi et al.
Research article2024Peer reviewed
Integrating experiments with modeling to understand key bacterial taxa dynamics after episodic mixing of a stratified water column
Wu, Hainan; Li, Yi; Bertilsson, Stefan et al.
2023
Research article2023Peer reviewed
Sulfate-reduction and methanogenesis are coupled to Hg(II) and MeHg reduction in rice paddies
Wu, Qingqing; Wang, Baolin; Hu, Haiyan et al.
Research article2023Peer reviewedOpen access
Microbial communities mediating net methylmercury formation along a trophic gradient in a peatland chronosequence
Wang, Baolin; Hu, Haiyan; Bishop, Kevin et al.
Research article2023Peer reviewed
Riverine microbial communities impacted by per- and polyfluoroalkyl substances (PFAS) emissions from a fluoropolymer-manufacturing plant
Guo, Chao; Ahrens, Lutz; Bertilsson, Stefan et al.
Research article2023Peer reviewedOpen access
Large-scale phylogenomics of aquatic bacteria reveal molecular mechanisms for adaptation to salinity
Jurdzinski, Krzysztof T.; Mehrshad, Maliheh; Delgado, Luis Fernando et al.
Research article2023Peer reviewedOpen access
Thiobacillus as a key player for biofilm formation in oligotrophic groundwaters of the Fennoscandian Shield
Lopez-Fernandez, Margarita; Westmeijer, George; Turner, Stephanie et al.
Review article2023Peer reviewed
Properly interpret metabolic inhibition results to identify primary mercury methylating microbes
Lei, Pei; Yu, Ri-Qing; Kong, Yaqi et al.
Research article2023Peer reviewedOpen access
Choice of methodology and surrogate prey are decisive for the quality of protistan bacterivory rate estimates
Florenza, Javier; Bertilsson, Stefan.
Research article2023Peer reviewedOpen access
Homogenisation of water and sediment bacterial communities in a shallow lake (lake Balihe, China)
Zhong, Meifang; Capo, Eric; Zhang, Huayong et al.
Research article2023Peer reviewedOpen access
Out of the blue: the independent activity of sulfur-oxidizers and diatoms mediate the sudden color shift of a tropical river
Arce-Rodriguez, Alejandro; Libby, Eduardo; Castellon, Erick et al.
Research article2023Peer reviewed
Microcosm experiment to test bacterial responses to perfluorooctanoate exposure
Guo, Chao; Ahrens, Lutz; Bertilsson, Stefan et al.
Research article2023Peer reviewedOpen access
A consensus protocol for the recovery of mercury methylation genes from metagenomes
Capo, Eric; Peterson, Benjamin D.; Kim, Minjae et al.
Review article2023Peer reviewedOpen access
Investigating the effects of anthropogenic stressors on lake biota using sedimentary DNA
Barouillet, Cecilia; Monchamp, Marie-Eve; Bertilsson, Stefan et al.
Research article2023Peer reviewedOpen access
Exploring environmental intra-species diversity through non-redundant pangenome assemblies
Puente-Sanchez, Fernando; Hoetzinger, Matthias; Buck, Moritz et al.
Research article2023Peer reviewedOpen access
Redox gradient shapes the abundance and diversity of mercury-methylating microorganisms along the water column of the Black Sea
Cabrol, L.; Capo, E.; van, Vliet, D.M. et al.
Research article2023Peer reviewedOpen access
Shotgun metagenomes from productive lakes in an urban region of Sweden
Rodriguez-Gijon, Alejandro; Hampel, Justyna J.; Dharamshi, Jennah et al.
2022
Research article2022Peer reviewedOpen access
Integrating multiple dimensions of ecological stability into a vulnerability framework
Urrutia-Cordero, Pablo; Langenheder, Silke; Striebel, Maren et al.