Skip to main content
SLU publication database (SLUpub)

Research article2023Peer reviewedOpen access

Patterns in soil microbial diversity across Europe

Labouyrie, Maeva; Ballabio, Cristiano; Romero, Ferran; Panagos, Panos; Jones, Arwyn; Schmid, Marc W.; Mikryukov, Vladimir; Dulya, Olesya; Tedersoo, Leho; Bahram, Mohammad; Lugato, Emanuele; van der Heijden, Marcel G. A.; Orgiazzi, Alberto

Abstract

Factors driving microbial community composition and diversity are well established but the relationship with microbial functioning is poorly understood, especially at large scales. We analysed microbial biodiversity metrics and distribution of potential functional groups along a gradient of increasing land-use perturbation, detecting over 79,000 bacterial and 25,000 fungal OTUs in 715 sites across 24 European countries. We found the lowest bacterial and fungal diversity in less-disturbed environments (woodlands) compared to grasslands and highly-disturbed environments (croplands). Highly-disturbed environments contain significantly more bacterial chemoheterotrophs, harbour a higher proportion of fungal plant pathogens and saprotrophs, and have less beneficial fungal plant symbionts compared to woodlands and extensively-managed grasslands. Spatial patterns of microbial communities and predicted functions are best explained when interactions among the major determinants (vegetation cover, climate, soil properties) are considered. We propose guidelines for environmental policy actions and argue that taxonomical and functional diversity should be considered simultaneously for monitoring purposes.

Published in

Nature Communications
2023, Volume: 14, number: 1, article number: 3311
Publisher: NATURE PORTFOLIO

    Associated SLU-program

    SLU Plant Protection Network
    SLU Forest Damage Center

    UKÄ Subject classification

    Microbiology
    Ecology

    More information

    Correction in: Nature Communications, 2023, Volume 14, Issue 1, Article Number: 4298, DOI: s41467-023-39596-x

    Publication identifier

    DOI: https://doi.org/10.1038/s41467-023-37937-4

    Permanent link to this page (URI)

    https://res.slu.se/id/publ/123780