Book chapter2023Peer reviewed
Sample preparation for fungal community analysis by high-throughput sequencing of barcode amplicons
Clemmensen, Karina; Ihrmark, Katarina; Brandström Durling, Mikael et al.
Publications
2023
2021
Research article2021Peer reviewedOpen access
Comparative genomics highlights the importance of drug efflux transporters during evolution of mycoparasitism in Clonostachys subgenus Bionectria (Fungi, Ascomycota, Hypocreales)
Broberg, Martin; Dubey, Mukesh; Iqbal, Mudassir et al.
Research article2021Peer reviewedOpen access
Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals potentially adaptive differences in secondary metabolite and transposable element repertoires
Elfstrand, Malin; Chen, Jun; Cleary, Michelle et al.
2020
Research article2020Peer reviewedOpen access
Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities
Castano, Carles; Berlin, Anna; Brandstrom Durling, Mikael et al.
Research article2020Peer reviewedOpen access
Marker-Trait Associations for Tolerance to Ash Dieback in Common Ash (Fraxinus excelsior L.)
Chaudhary, Rajiv; Ronneburg, Tilman; Aslund, Matilda Stein et al.
Research article2020Peer reviewedOpen access
Fungal ecological strategies reflected in gene transcription - a case study of two litter decomposers
Barbi, Florian; Kohler, Annegret; Barry, Kerrie et al.
2019
Research article2019Peer reviewedOpen access
Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum
Clergeot, Pierre-Henri; Rode, Nicolas O.; Glemin, Sylvain et al.
2018
Research article2018Peer reviewedOpen access
Out in the Cold: Identification of Genomic Regions Associated With Cold Tolerance in the Biocontrol Fungus Clonostachys rosea Through Genome-Wide Association Mapping
Broberg, Martin; Dubey, Mukesh; Sun, Man-Hong et al.
2017
Research article2017Peer reviewed
Genomes of Hymenoscyphus fraxineus and Hymenoscyphus albida encode surprisingly large cell wall degrading potential, balancing saprotrophic and necrotrophic signatures
Stenlid, Jan; Elfstrand, Malin; Cleary, Michelle et al.
2016
Research article2016Peer reviewedOpen access
Do foliar fungal communities of Norway spruce shift along a tree species diversity gradient in mature European forests?
Nguyen, Diem; Boberg, Johanna; Ihrmark, Katarina et al.
Research article2016Peer reviewedOpen access
Different Alleles of a Gene Encoding Leucoanthocyanidin Reductase (PaLAR3) Influence Resistance against the Fungus Heterobasidion parviporum in Picea abies
Nemesio Gorriz, Miguel; Hammerbacher, Almuth; Ihrmark, Katarina et al.
Book chapter2016Peer reviewed
Sample Preparation for Fungal Community Analysis by High-Throughput Sequencing of Barcode Amplicons
Clemmensen, Karina Engelbrecht; Ihrmark, Katarina; Durling, Mikael Brandstrom et al.;Martin, F (ed.);Uroz, S (ed.).
2015
Research article2015Peer reviewedOpen access
Transcriptional Responses Associated with Virulence and Defence in the Interaction between Heterobasidion annosum s. s. and Norway Spruce
Lundén, Karl; Danielsson, Marie; Brandström Durling, Mikael et al.
Research article2015Peer reviewed
The primer fITS9 prevents chimera formation during fungal DNA amplification in a bark beetle DNA background
Strid, Ylva; Ihrmark, Katarina; Stenlid, Jan.
2014
Book chapter2014Peer reviewed
Molecular Evolution of Trichoderma Chitinases
Seidl-Seiboth, Verena; Ihrmark, Katarina; Druzhinina, Irina et al.
Research article2014Peer reviewed
Root-Associated Fungi of Rosa rugosa Grown on the Frontal Dunes of the Baltic Sea Coast in Lithuania
Menkis, Audrius; Ihrmark, Katarina; Stenlid, Jan et al.
Research article2014Peer reviewed
Bark beetles have a decisive impact on fungal communities in Norway spruce stem sections
Strid, Ylva; Schroeder, Martin; Lindahl, Björn et al.
2013
Research article2013Peer reviewedOpen access
Extensive Trans-Specific Polymorphism at the Mating Type Locus of the Root Decay Fungus Heterobasidion
van Diepen, Linda T A; Olson, Åke; Ihrmark, Katarina et al.
Research article2013Peer reviewed
Fungal communities associated with field grown oilseed rape (Brassica napus L.) - their possible role in early crop establishment
Neupane, Saraswoti; Andersson, Björn; Högberg, Nils et al.
2012
Research article2012Peer reviewedOpen access
New primers to amplify the fungal ITS2 region–evaluation by 454‐sequencing of artificial and natural communities
Ihrmark, Katarina; Bödeker, Inga; Cruz‐Martinez, Karelyn et al.
2011
Conference paper2011
Identification of adaptive evolutionary changes in Trichoderma chitinase chi18-13
Karlsson, Magnus; Ihrmark, Katarina; Asmail, Nashwan et al.
Research article2011Peer reviewedOpen access
The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi
Eastwood, Daniel; Floudas, Dimitris; Binder, Manfred et al.
Research article2011Peer reviewed
Decomposing capacity of fungi commonly detected in Pinus sylvestris needle litter
Boberg, Johanna; Ihrmark, Katarina; Lindahl, Björn.
Research article2011Peer reviewedOpen access
Chemical and transcriptional responses of Norway spruce genotypes with different susceptibility to Heterobasidion spp. infection
Danielsson, Marie; Lundén, Karl; Elfstrand, Malin et al.
Research article2011Peer reviewed
A canker and dieback disease threatening the cultivation of Grevillea robusta on small-scale farms in Kenya
Njuguna, Jane W.; Barklund, Pia; Ihrmark, Katarina et al.