Bokkapitel2023Vetenskapligt granskad
Sample preparation for fungal community analysis by high-throughput sequencing of barcode amplicons
Clemmensen, Karina; Ihrmark, Katarina; Brandström Durling, Mikael et al.
Katarina Ihrmark
Institutionen för skoglig mykologi och växtpatologi
E-post: katarina.ihrmark@slu.se
Publikationer
2023
2021
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Comparative genomics highlights the importance of drug efflux transporters during evolution of mycoparasitism in Clonostachys subgenus Bionectria (Fungi, Ascomycota, Hypocreales)
Broberg, Martin; Dubey, Mukesh; Iqbal, Mudassir et al.
Forskningsartikel2021Vetenskapligt granskadÖppen tillgång
Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals potentially adaptive differences in secondary metabolite and transposable element repertoires
Elfstrand, Malin; Chen, Jun; Cleary, Michelle et al.
2020
Forskningsartikel2020Vetenskapligt granskadÖppen tillgång
Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities
Castano, Carles; Berlin, Anna; Brandstrom Durling, Mikael et al.
Forskningsartikel2020Vetenskapligt granskadÖppen tillgång
Marker-Trait Associations for Tolerance to Ash Dieback in Common Ash (Fraxinus excelsior L.)
Chaudhary, Rajiv; Ronneburg, Tilman; Aslund, Matilda Stein et al.
Forskningsartikel2020Vetenskapligt granskadÖppen tillgång
Fungal ecological strategies reflected in gene transcription - a case study of two litter decomposers
Barbi, Florian; Kohler, Annegret; Barry, Kerrie et al.
2019
Forskningsartikel2019Vetenskapligt granskadÖppen tillgång
Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum
Clergeot, Pierre-Henri; Rode, Nicolas O.; Glemin, Sylvain et al.
2018
Forskningsartikel2018Vetenskapligt granskadÖppen tillgång
Out in the Cold: Identification of Genomic Regions Associated With Cold Tolerance in the Biocontrol Fungus Clonostachys rosea Through Genome-Wide Association Mapping
Broberg, Martin; Dubey, Mukesh; Sun, Man-Hong et al.
2017
Forskningsartikel2017Vetenskapligt granskad
Genomes of Hymenoscyphus fraxineus and Hymenoscyphus albida encode surprisingly large cell wall degrading potential, balancing saprotrophic and necrotrophic signatures
Stenlid, Jan; Elfstrand, Malin; Cleary, Michelle et al.
2016
Forskningsartikel2016Vetenskapligt granskadÖppen tillgång
Do foliar fungal communities of Norway spruce shift along a tree species diversity gradient in mature European forests?
Nguyen, Diem; Boberg, Johanna; Ihrmark, Katarina et al.
Forskningsartikel2016Vetenskapligt granskadÖppen tillgång
Different Alleles of a Gene Encoding Leucoanthocyanidin Reductase (PaLAR3) Influence Resistance against the Fungus Heterobasidion parviporum in Picea abies
Nemesio Gorriz, Miguel; Hammerbacher, Almuth; Ihrmark, Katarina et al.
Bokkapitel2016Vetenskapligt granskad
Sample Preparation for Fungal Community Analysis by High-Throughput Sequencing of Barcode Amplicons
Clemmensen, Karina Engelbrecht; Ihrmark, Katarina; Durling, Mikael Brandstrom et al.;Martin, F (red.);Uroz, S (red.).
2015
Forskningsartikel2015Vetenskapligt granskadÖppen tillgång
Transcriptional Responses Associated with Virulence and Defence in the Interaction between Heterobasidion annosum s. s. and Norway Spruce
Lundén, Karl; Danielsson, Marie; Brandström Durling, Mikael et al.
Forskningsartikel2015Vetenskapligt granskad
The primer fITS9 prevents chimera formation during fungal DNA amplification in a bark beetle DNA background
Strid, Ylva; Ihrmark, Katarina; Stenlid, Jan.
2014
Bokkapitel2014Vetenskapligt granskad
Molecular Evolution of Trichoderma Chitinases
Seidl-Seiboth, Verena; Ihrmark, Katarina; Druzhinina, Irina et al.
Forskningsartikel2014Vetenskapligt granskad
Root-Associated Fungi of Rosa rugosa Grown on the Frontal Dunes of the Baltic Sea Coast in Lithuania
Menkis, Audrius; Ihrmark, Katarina; Stenlid, Jan et al.
Forskningsartikel2014Vetenskapligt granskad
Bark beetles have a decisive impact on fungal communities in Norway spruce stem sections
Strid, Ylva; Schroeder, Martin; Lindahl, Björn et al.
2013
Forskningsartikel2013Vetenskapligt granskadÖppen tillgång
Extensive Trans-Specific Polymorphism at the Mating Type Locus of the Root Decay Fungus Heterobasidion
van Diepen, Linda T A; Olson, Åke; Ihrmark, Katarina et al.
Forskningsartikel2013Vetenskapligt granskad
Fungal communities associated with field grown oilseed rape (Brassica napus L.) - their possible role in early crop establishment
Neupane, Saraswoti; Andersson, Björn; Högberg, Nils et al.
2012
Forskningsartikel2012Vetenskapligt granskadÖppen tillgång
New primers to amplify the fungal ITS2 region–evaluation by 454‐sequencing of artificial and natural communities
Ihrmark, Katarina; Bödeker, Inga; Cruz‐Martinez, Karelyn et al.
2011
Konferensartikel2011
Identification of adaptive evolutionary changes in Trichoderma chitinase chi18-13
Karlsson, Magnus; Ihrmark, Katarina; Asmail, Nashwan et al.
Forskningsartikel2011Vetenskapligt granskadÖppen tillgång
The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi
Eastwood, Daniel; Floudas, Dimitris; Binder, Manfred et al.
Forskningsartikel2011Vetenskapligt granskad
Decomposing capacity of fungi commonly detected in Pinus sylvestris needle litter
Boberg, Johanna; Ihrmark, Katarina; Lindahl, Björn.
Forskningsartikel2011Vetenskapligt granskadÖppen tillgång
Chemical and transcriptional responses of Norway spruce genotypes with different susceptibility to Heterobasidion spp. infection
Danielsson, Marie; Lundén, Karl; Elfstrand, Malin et al.
Forskningsartikel2011Vetenskapligt granskad
A canker and dieback disease threatening the cultivation of Grevillea robusta on small-scale farms in Kenya
Njuguna, Jane W.; Barklund, Pia; Ihrmark, Katarina et al.