MASQOT-GUI: spot quality assessment for the two-channel microarray platform

Sammanfattning

MASQOT-GUI provides an open-source, platform-independent software pipeline for two-channel microarray spot quality control. This includes gridding, segmentation, quantification, quality assessment and data visualization. It hosts a set of independent applications, with interactions between the tools as well as import and export support for external software. The implementation of automated multivariate quality control assessment, which is a unique feature of MASQOT-GUI, is based on the previously documented and evaluated MASQOT methodology. Further abilities of the application are outlined and illustrated

Publicerad i

Bioinformatics
2006, volym: 22, nummer: 20, sidor: 2554-2555
Utgivare: OXFORD UNIV PRESS

SLU författare

• Hoffman, Daniel

  • Institutionen för skoglig genetik och växtfysiologi, Sveriges lantbruksuniversitet
    

• Moritz, Thomas

  • Institutionen för skoglig genetik och växtfysiologi, Sveriges lantbruksuniversitet
    

UKÄ forskningsämne

Skogsvetenskap

Publikationens identifierare

• DOI: https://doi.org/10.1093/bioinformatics/btl434

Permanent länk till denna sida (URI)

https://res.slu.se/id/publ/10257