Skip to main content
SLU:s publikationsdatabas (SLUpub)
Forskningsartikel - Refereegranskat, 2015

Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3

Manzoor, Shahid; Müller, Bettina; Niazi, Adnan; Schnürer, Anna; Bongcam-Rudloff, Erik

Sammanfattning

Syntrophaceticus schinkii strain Sp3 is a mesophilic syntrophic acetate oxidizing bacterium, belonging to the Clostridia class within the phylum Firmicutes, originally isolated from a mesophilic methanogenic digester. It has been shown to oxidize acetate in co-cultivation with hydrogenotrophic methanogens forming methane. The draft genome shows a total size of 3,196,921 bp, encoding 3,688 open reading frames, which includes 3,445 predicted protein-encoding genes and 55 RNA genes. Here, we are presenting assembly and annotation features as well as basic genomic properties of the type strain Sp3.

Nyckelord

Syntrophic acetate oxidizing bacteria; Acetogens; Syntrophy; Methanogens; Hydrogen producer; Methane production

Publicerad i

Standards in Genomic Sciences
2015, Volym: 10, artikelnummer: 99
Utgivare: BIOMED CENTRAL LTD